Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc4Q08624 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Rmrp-201ENSMUST00000157463 271 ntBASIC12.3□□□□□ -0.44
Hoxc4Q08624 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm18056-201ENSMUST00000207670 568 ntBASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm18061-201ENSMUST00000208350 562 ntBASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm18063-201ENSMUST00000208529 568 ntBASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm18052-201ENSMUST00000208750 559 ntBASIC12.3□□□□□ -0.44
Hoxc4Q08624 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.3□□□□□ -0.44
Hoxc4Q08624 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.3□□□□□ -0.44
Hoxc4Q08624 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Hoxc4Q08624 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.29□□□□□ -0.44
Hoxc4Q08624 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Gm11597-201ENSMUST00000121423 964 ntBASIC12.29□□□□□ -0.44
Hoxc4Q08624 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Gm27046-201ENSMUST00000182160 463 ntBASIC12.29□□□□□ -0.44
Hoxc4Q08624 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.29□□□□□ -0.44
Hoxc4Q08624 AA914427-201ENSMUST00000193194 1166 ntBASIC12.29□□□□□ -0.44
Hoxc4Q08624 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.29□□□□□ -0.44
Hoxc4Q08624 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxc4Q08624 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gm28882-201ENSMUST00000185504 314 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms