Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.01□□□□□ -0.33
Ebf1Q07802 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.01□□□□□ -0.33
Ebf1Q07802 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf1Q07802 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Ebf1Q07802 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ebf1Q07802 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ebf1Q07802 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Gm2606-201ENSMUST00000100754 1002 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Gm12539-201ENSMUST00000121549 1098 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Gm14017-201ENSMUST00000121934 386 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Gm11978-201ENSMUST00000122315 466 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13□□□□□ -0.33
Ebf1Q07802 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13□□□□□ -0.33
Ebf1Q07802 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ebf1Q07802 Gm8738-201ENSMUST00000172606 329 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Ebf1Q07802 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13□□□□□ -0.33
Ebf1Q07802 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Gm30285-201ENSMUST00000214614 422 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Gm7293-201ENSMUST00000216682 1007 ntBASIC13□□□□□ -0.33
Ebf1Q07802 AC135669.1-202ENSMUST00000216742 540 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ebf1Q07802 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ebf1Q07802 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ebf1Q07802 Gm26616-202ENSMUST00000195676 3107 ntBASIC13□□□□□ -0.33
Ebf1Q07802 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ebf1Q07802 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13□□□□□ -0.33
Ebf1Q07802 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13□□□□□ -0.33
Ebf1Q07802 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ebf1Q07802 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf1Q07802 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.99□□□□□ -0.33
Ebf1Q07802 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.99□□□□□ -0.33
Ebf1Q07802 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.99□□□□□ -0.33
Ebf1Q07802 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Gm26956-201ENSMUST00000182176 986 ntBASIC12.99□□□□□ -0.33
Ebf1Q07802 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms