Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.53□□□□□ -0.08
GabpaQ00422 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.53□□□□□ -0.08
GabpaQ00422 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.53□□□□□ -0.08
GabpaQ00422 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.53□□□□□ -0.08
GabpaQ00422 Gm13570-201ENSMUST00000140763 309 ntBASIC14.53□□□□□ -0.08
GabpaQ00422 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
GabpaQ00422 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
GabpaQ00422 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.53□□□□□ -0.08
GabpaQ00422 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GabpaQ00422 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
GabpaQ00422 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GabpaQ00422 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
GabpaQ00422 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.52□□□□□ -0.08
GabpaQ00422 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GabpaQ00422 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 Acot6-202ENSMUST00000222921 3622 ntBASIC14.52□□□□□ -0.08
GabpaQ00422 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
GabpaQ00422 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.52□□□□□ -0.08
GabpaQ00422 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GabpaQ00422 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
GabpaQ00422 Gm14109-201ENSMUST00000118814 309 ntBASIC14.52□□□□□ -0.09
GabpaQ00422 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.52□□□□□ -0.09
GabpaQ00422 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
GabpaQ00422 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.52□□□□□ -0.09
GabpaQ00422 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Mir7070-201ENSMUST00000183657 86 ntBASIC14.52□□□□□ -0.09
GabpaQ00422 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.52□□□□□ -0.09
GabpaQ00422 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
GabpaQ00422 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.52□□□□□ -0.09
GabpaQ00422 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GabpaQ00422 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GabpaQ00422 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.51□□□□□ -0.09
GabpaQ00422 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.51□□□□□ -0.09
GabpaQ00422 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.51□□□□□ -0.09
GabpaQ00422 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.51□□□□□ -0.09
GabpaQ00422 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GabpaQ00422 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.51□□□□□ -0.09
GabpaQ00422 Gm37201-201ENSMUST00000191845 523 ntBASIC14.51□□□□□ -0.09
GabpaQ00422 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.51□□□□□ -0.09
GabpaQ00422 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GabpaQ00422 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms