Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.62□□□□□ -0.71
Gfra1P97785 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.62□□□□□ -0.71
Gfra1P97785 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Gfra1P97785 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Gfra1P97785 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Gfra1P97785 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.62□□□□□ -0.71
Gfra1P97785 Mir1247-201ENSMUST00000116706 82 ntBASIC10.62□□□□□ -0.71
Gfra1P97785 Gm15198-201ENSMUST00000117283 177 ntBASIC10.62□□□□□ -0.71
Gfra1P97785 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Gm12363-201ENSMUST00000122250 668 ntBASIC10.62□□□□□ -0.71
Gfra1P97785 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Gm25261-201ENSMUST00000157416 134 ntBASIC10.62□□□□□ -0.71
Gfra1P97785 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.62□□□□□ -0.71
Gfra1P97785 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Gfra1P97785 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.62□□□□□ -0.71
Gfra1P97785 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.62□□□□□ -0.71
Gfra1P97785 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Gfra1P97785 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.62□□□□□ -0.71
Gfra1P97785 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Gfra1P97785 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Gfra1P97785 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.62□□□□□ -0.71
Gfra1P97785 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Gfra1P97785 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Gfra1P97785 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Gfra1P97785 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Gfra1P97785 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Gfra1P97785 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Gm11591-201ENSMUST00000120063 702 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Gm11793-201ENSMUST00000120433 981 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.61□□□□□ -0.71
Gfra1P97785 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.61□□□□□ -0.71
Gfra1P97785 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.61□□□□□ -0.71
Gfra1P97785 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Gm43118-201ENSMUST00000199149 775 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Gm3961-201ENSMUST00000204425 994 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Gm9823-201ENSMUST00000051212 327 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Gfra1P97785 Olfr582-201ENSMUST00000098212 960 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Gfra1P97785 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.61□□□□□ -0.71
Gfra1P97785 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Gfra1P97785 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Gfra1P97785 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.61□□□□□ -0.71
Gfra1P97785 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Gfra1P97785 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.61□□□□□ -0.71
Gfra1P97785 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Gfra1P97785 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Gfra1P97785 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms