Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.46□□□□□ -0.57
SgcbP82349 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.46□□□□□ -0.57
SgcbP82349 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.46□□□□□ -0.57
SgcbP82349 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcbP82349 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SgcbP82349 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
SgcbP82349 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SgcbP82349 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.46□□□□□ -0.58
SgcbP82349 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.46□□□□□ -0.58
SgcbP82349 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcbP82349 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SgcbP82349 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.45□□□□□ -0.58
SgcbP82349 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SgcbP82349 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SgcbP82349 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.45□□□□□ -0.58
SgcbP82349 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SgcbP82349 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.45□□□□□ -0.58
SgcbP82349 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.45□□□□□ -0.58
SgcbP82349 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
SgcbP82349 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Gm25927-201ENSMUST00000175058 117 ntBASIC11.45□□□□□ -0.58
SgcbP82349 Gm27572-201ENSMUST00000183702 255 ntBASIC11.45□□□□□ -0.58
SgcbP82349 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.45□□□□□ -0.58
SgcbP82349 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.45□□□□□ -0.58
SgcbP82349 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SgcbP82349 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SgcbP82349 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SgcbP82349 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.45□□□□□ -0.58
SgcbP82349 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.45□□□□□ -0.58
SgcbP82349 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.45□□□□□ -0.58
SgcbP82349 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcbP82349 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SgcbP82349 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcbP82349 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SgcbP82349 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
SgcbP82349 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.44□□□□□ -0.58
SgcbP82349 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.44□□□□□ -0.58
SgcbP82349 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SgcbP82349 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Gm14704-201ENSMUST00000120300 874 ntBASIC11.44□□□□□ -0.58
SgcbP82349 Gm12363-201ENSMUST00000122250 668 ntBASIC11.44□□□□□ -0.58
SgcbP82349 Gm16379-201ENSMUST00000161469 348 ntBASIC11.44□□□□□ -0.58
SgcbP82349 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcbP82349 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SgcbP82349 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcbP82349 Gm8762-201ENSMUST00000193486 339 ntBASIC11.44□□□□□ -0.58
SgcbP82349 Gm45880-201ENSMUST00000213041 853 ntBASIC11.44□□□□□ -0.58
SgcbP82349 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms