Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six5P70178 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.02□□□□□ -0.49
Six5P70178 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six5P70178 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six5P70178 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six5P70178 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six5P70178 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six5P70178 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six5P70178 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Six5P70178 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
Six5P70178 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Six5P70178 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.01□□□□□ -0.49
Six5P70178 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Gm23363-201ENSMUST00000175024 79 ntBASIC12.01□□□□□ -0.49
Six5P70178 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Gm27682-201ENSMUST00000183930 110 ntBASIC12.01□□□□□ -0.49
Six5P70178 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.01□□□□□ -0.49
Six5P70178 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.01□□□□□ -0.49
Six5P70178 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.01□□□□□ -0.49
Six5P70178 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.01□□□□□ -0.49
Six5P70178 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Mir339-201ENSMUST00000083659 96 ntBASIC12.01□□□□□ -0.49
Six5P70178 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Six5P70178 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Six5P70178 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.01□□□□□ -0.49
Six5P70178 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Six5P70178 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six5P70178 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12□□□□□ -0.49
Six5P70178 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Six5P70178 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Six5P70178 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12□□□□□ -0.49
Six5P70178 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Six5P70178 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12□□□□□ -0.49
Six5P70178 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Gm6266-201ENSMUST00000203844 806 ntBASIC12□□□□□ -0.49
Six5P70178 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12□□□□□ -0.49
Six5P70178 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12□□□□□ -0.49
Six5P70178 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12□□□□□ -0.49
Six5P70178 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Six5P70178 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Six5P70178 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six5P70178 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms