Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Crnkl1P63154 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Crnkl1P63154 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.7□□□□□ -0.38
Crnkl1P63154 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Gm27838-201ENSMUST00000184829 128 ntBASIC12.7□□□□□ -0.38
Crnkl1P63154 Mir6977-201ENSMUST00000184960 64 ntBASIC12.7□□□□□ -0.38
Crnkl1P63154 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.7□□□□□ -0.38
Crnkl1P63154 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.7□□□□□ -0.38
Crnkl1P63154 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.7□□□□□ -0.38
Crnkl1P63154 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Crnkl1P63154 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.7□□□□□ -0.38
Crnkl1P63154 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.69□□□□□ -0.38
Crnkl1P63154 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm15460-201ENSMUST00000118147 391 ntBASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm15393-201ENSMUST00000120499 219 ntBASIC12.69□□□□□ -0.38
Crnkl1P63154 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.69□□□□□ -0.38
Crnkl1P63154 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.69□□□□□ -0.38
Crnkl1P63154 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.69□□□□□ -0.38
Crnkl1P63154 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.69□□□□□ -0.38
Crnkl1P63154 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Crnkl1P63154 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.69□□□□□ -0.38
Crnkl1P63154 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms