Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ThraP63058 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ThraP63058 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.01□□□□□ -0.33
ThraP63058 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
ThraP63058 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ThraP63058 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ThraP63058 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ThraP63058 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Gm44401-201ENSMUST00000204462 2375 ntBASIC13□□□□□ -0.33
ThraP63058 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13□□□□□ -0.33
ThraP63058 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13□□□□□ -0.33
ThraP63058 Rnf17-202ENSMUST00000223627 2077 ntBASIC13□□□□□ -0.33
ThraP63058 Gm17435-202ENSMUST00000212699 1998 ntBASIC13□□□□□ -0.33
ThraP63058 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ThraP63058 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
ThraP63058 Gm12846-201ENSMUST00000120431 1373 ntBASIC13□□□□□ -0.33
ThraP63058 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ThraP63058 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13□□□□□ -0.33
ThraP63058 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13□□□□□ -0.33
ThraP63058 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13□□□□□ -0.33
ThraP63058 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13□□□□□ -0.33
ThraP63058 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13□□□□□ -0.33
ThraP63058 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
ThraP63058 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ThraP63058 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13□□□□□ -0.33
ThraP63058 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ThraP63058 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.99□□□□□ -0.33
ThraP63058 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ThraP63058 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.99□□□□□ -0.33
ThraP63058 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.99□□□□□ -0.33
ThraP63058 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.99□□□□□ -0.33
ThraP63058 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.99□□□□□ -0.33
ThraP63058 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ThraP63058 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ThraP63058 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ThraP63058 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ThraP63058 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
ThraP63058 Gm43179-201ENSMUST00000198797 275 ntBASIC12.99□□□□□ -0.33
ThraP63058 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.99□□□□□ -0.33
ThraP63058 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Gm18054-201ENSMUST00000207539 555 ntBASIC12.99□□□□□ -0.33
ThraP63058 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Gm7399-201ENSMUST00000032395 858 ntBASIC12.99□□□□□ -0.33
ThraP63058 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ThraP63058 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.99□□□□□ -0.33
ThraP63058 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
ThraP63058 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ThraP63058 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms