Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lhx1P63006 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.6□□□□□ -0.39
Lhx1P63006 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.6□□□□□ -0.39
Lhx1P63006 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lhx1P63006 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.59□□□□□ -0.39
Lhx1P63006 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Daam2-202ENSMUST00000224595 1926 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Lhx1P63006 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lhx1P63006 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lhx1P63006 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lhx1P63006 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lhx1P63006 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lhx1P63006 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lhx1P63006 Gm14723-201ENSMUST00000118686 215 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.59□□□□□ -0.39
Lhx1P63006 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.59□□□□□ -0.39
Lhx1P63006 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Morn2-202ENSMUST00000227729 656 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Gm22058-201ENSMUST00000083393 310 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lhx1P63006 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lhx1P63006 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lhx1P63006 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.59□□□□□ -0.39
Lhx1P63006 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lhx1P63006 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lhx1P63006 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Lhx1P63006 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Rubie-203ENSMUST00000227803 2430 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lhx1P63006 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lhx1P63006 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Gm11222-201ENSMUST00000119005 738 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm13316-201ENSMUST00000140537 691 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm16296-201ENSMUST00000159905 325 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.58□□□□□ -0.4
Lhx1P63006 Mir8109-201ENSMUST00000184375 117 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Gm45925-201ENSMUST00000218882 744 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lhx1P63006 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lhx1P63006 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms