Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm1P58771 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tpm1P58771 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Gm26684-202ENSMUST00000228229 8257 ntBASIC14.31□□□□□ -0.12
Tpm1P58771 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm1P58771 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Tpm1P58771 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm1P58771 Gm38294-201ENSMUST00000192831 381 ntBASIC14.31□□□□□ -0.12
Tpm1P58771 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.31□□□□□ -0.12
Tpm1P58771 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Tpm1P58771 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tpm1P58771 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm1P58771 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.31□□□□□ -0.12
Tpm1P58771 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tpm1P58771 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm1P58771 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tpm1P58771 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm1P58771 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tpm1P58771 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.3□□□□□ -0.12
Tpm1P58771 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm1P58771 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.3□□□□□ -0.12
Tpm1P58771 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Tpm1P58771 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm1P58771 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.3□□□□□ -0.12
Tpm1P58771 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Tpm1P58771 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tpm1P58771 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm1P58771 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm1P58771 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Daam2-202ENSMUST00000224595 1926 ntBASIC14.29□□□□□ -0.12
Tpm1P58771 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tpm1P58771 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.29□□□□□ -0.12
Tpm1P58771 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Tpm1P58771 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Tpm1P58771 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Tpm1P58771 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tpm1P58771 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.29□□□□□ -0.12
Tpm1P58771 Gm7775-201ENSMUST00000218871 853 ntBASIC14.29□□□□□ -0.12
Tpm1P58771 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.29□□□□□ -0.12
Tpm1P58771 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm1P58771 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms