Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cacnb3P54285 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Gm13996-201ENSMUST00000118456 430 ntBASIC14.92□□□□□ -0.02
Cacnb3P54285 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Cacnb3P54285 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.92□□□□□ -0.02
Cacnb3P54285 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.92□□□□□ -0.02
Cacnb3P54285 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.92□□□□□ -0.02
Cacnb3P54285 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Cacnb3P54285 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Cacnb3P54285 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Cacnb3P54285 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.92□□□□□ -0.02
Cacnb3P54285 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cacnb3P54285 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacnb3P54285 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Gm5070-201ENSMUST00000177599 862 ntBASIC14.91□□□□□ -0.02
Cacnb3P54285 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cacnb3P54285 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacnb3P54285 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Gm14921-201ENSMUST00000118643 908 ntBASIC14.9□□□□□ -0.02
Cacnb3P54285 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Gm42997-202ENSMUST00000200321 985 ntBASIC14.9□□□□□ -0.02
Cacnb3P54285 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.9□□□□□ -0.02
Cacnb3P54285 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.9□□□□□ -0.02
Cacnb3P54285 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.9□□□□□ -0.02
Cacnb3P54285 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cacnb3P54285 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.9□□□□□ -0.02
Cacnb3P54285 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacnb3P54285 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacnb3P54285 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cacnb3P54285 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacnb3P54285 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacnb3P54285 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacnb3P54285 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacnb3P54285 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms