Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Fdft1P53798 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.83□□□□□ -0.36
Fdft1P53798 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.83□□□□□ -0.36
Fdft1P53798 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.83□□□□□ -0.36
Fdft1P53798 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.83□□□□□ -0.36
Fdft1P53798 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Fdft1P53798 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.83□□□□□ -0.36
Fdft1P53798 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fdft1P53798 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Fdft1P53798 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.82□□□□□ -0.36
Fdft1P53798 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fdft1P53798 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fdft1P53798 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fdft1P53798 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fdft1P53798 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fdft1P53798 Gm11978-201ENSMUST00000122315 466 ntBASIC12.82□□□□□ -0.36
Fdft1P53798 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Fdft1P53798 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.82□□□□□ -0.36
Fdft1P53798 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fdft1P53798 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fdft1P53798 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.82□□□□□ -0.36
Fdft1P53798 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fdft1P53798 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fdft1P53798 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.81□□□□□ -0.36
Fdft1P53798 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fdft1P53798 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.81□□□□□ -0.36
Fdft1P53798 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Fdft1P53798 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Gm12138-201ENSMUST00000122180 951 ntBASIC12.81□□□□□ -0.36
Fdft1P53798 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.81□□□□□ -0.36
Fdft1P53798 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Gm6458-201ENSMUST00000211573 635 ntBASIC12.81□□□□□ -0.36
Fdft1P53798 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Fdft1P53798 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fdft1P53798 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.81□□□□□ -0.36
Fdft1P53798 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fdft1P53798 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fdft1P53798 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms