Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Shmt1P50431 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shmt1P50431 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shmt1P50431 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Shmt1P50431 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Shmt1P50431 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.55□□□□□ -0.24
Shmt1P50431 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Gm16296-201ENSMUST00000159905 325 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.55□□□□□ -0.24
Shmt1P50431 Gm29396-201ENSMUST00000185659 716 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 Gm3961-201ENSMUST00000204425 994 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.55□□□□□ -0.24
Shmt1P50431 Gm18935-201ENSMUST00000212692 664 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.55□□□□□ -0.24
Shmt1P50431 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shmt1P50431 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shmt1P50431 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shmt1P50431 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Shmt1P50431 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Shmt1P50431 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Shmt1P50431 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shmt1P50431 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Shmt1P50431 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Shmt1P50431 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.54□□□□□ -0.24
Shmt1P50431 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.54□□□□□ -0.24
Shmt1P50431 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.54□□□□□ -0.24
Shmt1P50431 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.54□□□□□ -0.24
Shmt1P50431 Gm7584-201ENSMUST00000175829 940 ntBASIC13.54□□□□□ -0.24
Shmt1P50431 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.54□□□□□ -0.24
Shmt1P50431 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shmt1P50431 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Shmt1P50431 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Shmt1P50431 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.53□□□□□ -0.24
Shmt1P50431 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.53□□□□□ -0.24
Shmt1P50431 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm15370-201ENSMUST00000117158 253 ntBASIC13.53□□□□□ -0.24
Shmt1P50431 Gm14921-201ENSMUST00000118643 908 ntBASIC13.53□□□□□ -0.24
Shmt1P50431 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm13350-201ENSMUST00000120519 479 ntBASIC13.53□□□□□ -0.24
Shmt1P50431 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.53□□□□□ -0.24
Shmt1P50431 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.53□□□□□ -0.24
Shmt1P50431 Gm6334-201ENSMUST00000207083 228 ntBASIC13.53□□□□□ -0.24
Shmt1P50431 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.53□□□□□ -0.24
Shmt1P50431 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.53□□□□□ -0.24
Shmt1P50431 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shmt1P50431 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Shmt1P50431 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms