Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LtbrP50284 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LtbrP50284 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
LtbrP50284 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LtbrP50284 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LtbrP50284 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LtbrP50284 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LtbrP50284 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.12■□□□□ 0.01
LtbrP50284 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LtbrP50284 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.12■□□□□ 0.01
LtbrP50284 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LtbrP50284 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.12■□□□□ 0.01
LtbrP50284 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.12■□□□□ 0.01
LtbrP50284 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.12■□□□□ 0.01
LtbrP50284 Gm43974-201ENSMUST00000205080 684 ntBASIC15.12■□□□□ 0.01
LtbrP50284 Gm44551-201ENSMUST00000208804 171 ntBASIC15.12■□□□□ 0.01
LtbrP50284 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LtbrP50284 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.12■□□□□ 0.01
LtbrP50284 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LtbrP50284 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LtbrP50284 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LtbrP50284 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.11■□□□□ 0.01
LtbrP50284 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LtbrP50284 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LtbrP50284 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Gm17208-201ENSMUST00000168388 535 ntBASIC15.11■□□□□ 0.01
LtbrP50284 Gm27552-201ENSMUST00000183351 62 ntBASIC15.11■□□□□ 0.01
LtbrP50284 Gm27844-201ENSMUST00000183613 62 ntBASIC15.11■□□□□ 0.01
LtbrP50284 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.11■□□□□ 0.01
LtbrP50284 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LtbrP50284 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.11■□□□□ 0.01
LtbrP50284 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LtbrP50284 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.11■□□□□ 0.01
LtbrP50284 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LtbrP50284 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LtbrP50284 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LtbrP50284 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LtbrP50284 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LtbrP50284 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.11■□□□□ 0.01
LtbrP50284 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LtbrP50284 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.1■□□□□ 0.01
LtbrP50284 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.1■□□□□ 0.01
LtbrP50284 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.1■□□□□ 0.01
LtbrP50284 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LtbrP50284 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.1■□□□□ 0.01
LtbrP50284 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.1■□□□□ 0.01
LtbrP50284 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.1■□□□□ 0.01
LtbrP50284 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.1■□□□□ 0.01
LtbrP50284 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.1■□□□□ 0.01
LtbrP50284 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.1■□□□□ 0.01
LtbrP50284 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.1■□□□□ 0.01
LtbrP50284 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LtbrP50284 Gm3096-201ENSMUST00000185770 364 ntBASIC15.1■□□□□ 0.01
LtbrP50284 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.1■□□□□ 0.01
LtbrP50284 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.1■□□□□ 0.01
LtbrP50284 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms