Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Brca1P48754 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Gm45120-201ENSMUST00000208880 408 ntBASIC14.13□□□□□ -0.15
Brca1P48754 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca1P48754 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.12□□□□□ -0.15
Brca1P48754 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Brca1P48754 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.12□□□□□ -0.15
Brca1P48754 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Brca1P48754 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Gm5419-201ENSMUST00000119301 527 ntBASIC14.12□□□□□ -0.15
Brca1P48754 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.12□□□□□ -0.15
Brca1P48754 Gm14760-201ENSMUST00000121831 999 ntBASIC14.12□□□□□ -0.15
Brca1P48754 Gm25545-201ENSMUST00000122673 323 ntBASIC14.12□□□□□ -0.15
Brca1P48754 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brca1P48754 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Brca1P48754 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.11□□□□□ -0.15
Brca1P48754 Gm18304-201ENSMUST00000189162 546 ntBASIC14.11□□□□□ -0.15
Brca1P48754 Gm3332-201ENSMUST00000189337 928 ntBASIC14.11□□□□□ -0.15
Brca1P48754 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Brca1P48754 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.11□□□□□ -0.15
Brca1P48754 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Mir7677-201ENSMUST00000184226 67 ntBASIC14.11□□□□□ -0.15
Brca1P48754 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Brca1P48754 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Brca1P48754 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Brca1P48754 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Brca1P48754 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Brca1P48754 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brca1P48754 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Brca1P48754 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Brca1P48754 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.1□□□□□ -0.15
Brca1P48754 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Brca1P48754 Gm8343-201ENSMUST00000182705 994 ntBASIC14.1□□□□□ -0.15
Brca1P48754 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms