Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
GdnfP48540 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
GdnfP48540 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Gm7488-201ENSMUST00000117148 684 ntBASIC11.27□□□□□ -0.61
GdnfP48540 Gm15770-201ENSMUST00000117498 584 ntBASIC11.27□□□□□ -0.61
GdnfP48540 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
GdnfP48540 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
GdnfP48540 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
GdnfP48540 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
GdnfP48540 Gm27772-201ENSMUST00000184900 187 ntBASIC11.27□□□□□ -0.61
GdnfP48540 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.27□□□□□ -0.61
GdnfP48540 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.27□□□□□ -0.61
GdnfP48540 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
GdnfP48540 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.27□□□□□ -0.61
GdnfP48540 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
GdnfP48540 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
GdnfP48540 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
GdnfP48540 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.27□□□□□ -0.61
GdnfP48540 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
GdnfP48540 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
GdnfP48540 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
GdnfP48540 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.26□□□□□ -0.61
GdnfP48540 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gm12859-201ENSMUST00000117834 427 ntBASIC11.26□□□□□ -0.61
GdnfP48540 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
GdnfP48540 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.26□□□□□ -0.61
GdnfP48540 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
GdnfP48540 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.26□□□□□ -0.61
GdnfP48540 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
GdnfP48540 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.26□□□□□ -0.61
GdnfP48540 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.26□□□□□ -0.61
GdnfP48540 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.26□□□□□ -0.61
GdnfP48540 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.26□□□□□ -0.61
GdnfP48540 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.26□□□□□ -0.61
GdnfP48540 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
GdnfP48540 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.26□□□□□ -0.61
GdnfP48540 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms