Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.02□□□□□ -0.49
Sox2P48432 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox2P48432 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox2P48432 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox2P48432 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox2P48432 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Sox2P48432 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox2P48432 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Sox2P48432 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox2P48432 Gm6736-201ENSMUST00000166583 948 ntBASIC12.01□□□□□ -0.49
Sox2P48432 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.01□□□□□ -0.49
Sox2P48432 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox2P48432 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Sox2P48432 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox2P48432 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox2P48432 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox2P48432 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Sox2P48432 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Sox2P48432 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox2P48432 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sox2P48432 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12□□□□□ -0.49
Sox2P48432 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12□□□□□ -0.49
Sox2P48432 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox2P48432 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gm23935-201ENSMUST00000102303 57 ntBASIC12□□□□□ -0.49
Sox2P48432 Gm24270-201ENSMUST00000102326 57 ntBASIC12□□□□□ -0.49
Sox2P48432 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gm24245-201ENSMUST00000157318 57 ntBASIC12□□□□□ -0.49
Sox2P48432 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox2P48432 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 AC132104.2-201ENSMUST00000215011 266 ntBASIC12□□□□□ -0.49
Sox2P48432 AC154305.4-201ENSMUST00000224520 614 ntBASIC12□□□□□ -0.49
Sox2P48432 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gm9797-201ENSMUST00000052902 613 ntBASIC12□□□□□ -0.49
Sox2P48432 Gm20445-201ENSMUST00000061905 565 ntBASIC12□□□□□ -0.49
Sox2P48432 Gm43075-201ENSMUST00000198613 3905 ntBASIC12□□□□□ -0.49
Sox2P48432 Gm6263-201ENSMUST00000120029 1342 ntBASIC12□□□□□ -0.49
Sox2P48432 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gm43721-201ENSMUST00000199677 2313 ntBASIC12□□□□□ -0.49
Sox2P48432 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12□□□□□ -0.49
Sox2P48432 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox2P48432 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox2P48432 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.99□□□□□ -0.49
Sox2P48432 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox2P48432 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox2P48432 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox2P48432 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.99□□□□□ -0.49
Sox2P48432 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.99□□□□□ -0.49
Sox2P48432 Gm13616-201ENSMUST00000120600 222 ntBASIC11.99□□□□□ -0.49
Sox2P48432 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox2P48432 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox2P48432 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms