Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rfx2P48379 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rfx2P48379 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.45□□□□□ -0.26
Rfx2P48379 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Gm12241-201ENSMUST00000118330 726 ntBASIC13.45□□□□□ -0.26
Rfx2P48379 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.45□□□□□ -0.26
Rfx2P48379 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.45□□□□□ -0.26
Rfx2P48379 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.45□□□□□ -0.26
Rfx2P48379 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Rfx2P48379 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rfx2P48379 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.45□□□□□ -0.26
Rfx2P48379 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rfx2P48379 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rfx2P48379 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Gm13342-201ENSMUST00000121055 207 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.44□□□□□ -0.26
Rfx2P48379 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.44□□□□□ -0.26
Rfx2P48379 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.44□□□□□ -0.26
Rfx2P48379 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Gm27516-201ENSMUST00000184237 98 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 Gm29396-201ENSMUST00000185659 716 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 Olfr284-202ENSMUST00000206647 966 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 Gm6458-201ENSMUST00000211573 635 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.44□□□□□ -0.26
Rfx2P48379 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.44□□□□□ -0.26
Rfx2P48379 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Rfx2P48379 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rfx2P48379 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rfx2P48379 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.44□□□□□ -0.26
Rfx2P48379 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.44□□□□□ -0.26
Rfx2P48379 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rfx2P48379 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfx2P48379 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rfx2P48379 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rfx2P48379 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.43□□□□□ -0.26
Rfx2P48379 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.43□□□□□ -0.26
Rfx2P48379 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.43□□□□□ -0.26
Rfx2P48379 Gm6023-201ENSMUST00000118217 606 ntBASIC13.43□□□□□ -0.26
Rfx2P48379 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rfx2P48379 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.43□□□□□ -0.26
Rfx2P48379 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfx2P48379 Gm45930-201ENSMUST00000221330 292 ntBASIC13.43□□□□□ -0.26
Rfx2P48379 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx2P48379 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rfx2P48379 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.43□□□□□ -0.26
Rfx2P48379 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms