Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gli1P47806 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.54□□□□□ -0.4
Gli1P47806 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.54□□□□□ -0.4
Gli1P47806 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.54□□□□□ -0.4
Gli1P47806 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Gli1P47806 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.54□□□□□ -0.4
Gli1P47806 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.54□□□□□ -0.4
Gli1P47806 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.54□□□□□ -0.4
Gli1P47806 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.54□□□□□ -0.4
Gli1P47806 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.54□□□□□ -0.4
Gli1P47806 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.54□□□□□ -0.4
Gli1P47806 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.54□□□□□ -0.4
Gli1P47806 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Gli1P47806 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.54□□□□□ -0.4
Gli1P47806 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.54□□□□□ -0.4
Gli1P47806 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gli1P47806 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.54□□□□□ -0.4
Gli1P47806 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gli1P47806 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Gli1P47806 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gli1P47806 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.53□□□□□ -0.4
Gli1P47806 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Gli1P47806 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.53□□□□□ -0.4
Gli1P47806 Snora78-201ENSMUST00000158630 128 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Gli1P47806 Gm27847-201ENSMUST00000183711 107 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Gm27375-201ENSMUST00000183799 107 ntBASIC12.53□□□□□ -0.4
Gli1P47806 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.53□□□□□ -0.4
Gli1P47806 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gli1P47806 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.53□□□□□ -0.4
Gli1P47806 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gli1P47806 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gli1P47806 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.53□□□□□ -0.4
Gli1P47806 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Gli1P47806 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.52□□□□□ -0.4
Gli1P47806 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gli1P47806 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Gli1P47806 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms