Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.6□□□□□ -0.71
Hist1h1aP43275 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.6□□□□□ -0.71
Hist1h1aP43275 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.6□□□□□ -0.71
Hist1h1aP43275 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Hist1h1aP43275 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.6□□□□□ -0.71
Hist1h1aP43275 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm24694-201ENSMUST00000180054 110 ntBASIC10.59□□□□□ -0.71
Hist1h1aP43275 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm27663-201ENSMUST00000184839 110 ntBASIC10.59□□□□□ -0.71
Hist1h1aP43275 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm42550-201ENSMUST00000201553 960 ntBASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Hist1h1aP43275 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms