Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Snord83b-201ENSMUST00000104546 94 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm13492-201ENSMUST00000119772 665 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm13297-201ENSMUST00000120205 934 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm7783-201ENSMUST00000204795 781 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.29□□□□□ -0.44
Tnfsf9P41274 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf9P41274 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.28□□□□□ -0.44
Tnfsf9P41274 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm12291-201ENSMUST00000121627 311 ntBASIC12.28□□□□□ -0.44
Tnfsf9P41274 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm38341-201ENSMUST00000195357 515 ntBASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm8227-201ENSMUST00000223306 571 ntBASIC12.28□□□□□ -0.44
Tnfsf9P41274 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.28□□□□□ -0.44
Tnfsf9P41274 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf9P41274 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Tnfsf9P41274 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms