Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Fen1P39749 Gm12485-201ENSMUST00000119641 291 ntBASIC12.93□□□□□ -0.34
Fen1P39749 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Fen1P39749 Gm29608-201ENSMUST00000190444 463 ntBASIC12.93□□□□□ -0.34
Fen1P39749 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.93□□□□□ -0.34
Fen1P39749 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fen1P39749 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.93□□□□□ -0.34
Fen1P39749 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Fen1P39749 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.93□□□□□ -0.34
Fen1P39749 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.93□□□□□ -0.34
Fen1P39749 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Fen1P39749 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Fen1P39749 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fen1P39749 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.93□□□□□ -0.34
Fen1P39749 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Fen1P39749 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.92□□□□□ -0.34
Fen1P39749 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.92□□□□□ -0.34
Fen1P39749 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Fen1P39749 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.92□□□□□ -0.34
Fen1P39749 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.92□□□□□ -0.34
Fen1P39749 Mir7684-201ENSMUST00000183858 60 ntBASIC12.92□□□□□ -0.34
Fen1P39749 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.92□□□□□ -0.34
Fen1P39749 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fen1P39749 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Fen1P39749 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fen1P39749 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.91□□□□□ -0.34
Fen1P39749 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.91□□□□□ -0.34
Fen1P39749 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fen1P39749 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Fen1P39749 Gm27306-201ENSMUST00000183970 107 ntBASIC12.91□□□□□ -0.34
Fen1P39749 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.91□□□□□ -0.34
Fen1P39749 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Fen1P39749 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.91□□□□□ -0.34
Fen1P39749 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fen1P39749 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Fen1P39749 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.91□□□□□ -0.34
Fen1P39749 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fen1P39749 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.9□□□□□ -0.34
Fen1P39749 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms