Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox5P35710 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.99□□□□□ -0.17
Sox5P35710 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.99□□□□□ -0.17
Sox5P35710 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox5P35710 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox5P35710 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Sox5P35710 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sox5P35710 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sox5P35710 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox5P35710 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Sox5P35710 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox5P35710 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Sox5P35710 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox5P35710 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Gm18473-201ENSMUST00000220543 868 ntBASIC13.98□□□□□ -0.17
Sox5P35710 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox5P35710 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox5P35710 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox5P35710 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.98□□□□□ -0.17
Sox5P35710 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox5P35710 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.97□□□□□ -0.17
Sox5P35710 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Sox5P35710 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox5P35710 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox5P35710 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox5P35710 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sox5P35710 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.97□□□□□ -0.17
Sox5P35710 Gm15920-201ENSMUST00000118998 402 ntBASIC13.97□□□□□ -0.17
Sox5P35710 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox5P35710 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox5P35710 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox5P35710 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Gm16372-201ENSMUST00000073088 450 ntBASIC13.97□□□□□ -0.17
Sox5P35710 Mir339-201ENSMUST00000083659 96 ntBASIC13.97□□□□□ -0.17
Sox5P35710 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Sox5P35710 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox5P35710 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Sox5P35710 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox5P35710 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox5P35710 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox5P35710 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox5P35710 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox5P35710 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Sox5P35710 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sox5P35710 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.96□□□□□ -0.17
Sox5P35710 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.96□□□□□ -0.17
Sox5P35710 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Sox5P35710 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox5P35710 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox5P35710 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms