Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.86□□□□□ -0.51
Foxa1P35582 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.86□□□□□ -0.51
Foxa1P35582 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.86□□□□□ -0.51
Foxa1P35582 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Foxa1P35582 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.86□□□□□ -0.51
Foxa1P35582 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.86□□□□□ -0.51
Foxa1P35582 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.86□□□□□ -0.51
Foxa1P35582 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Foxa1P35582 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Foxa1P35582 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.86□□□□□ -0.51
Foxa1P35582 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Foxa1P35582 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Foxa1P35582 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Foxa1P35582 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.85□□□□□ -0.51
Foxa1P35582 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Foxa1P35582 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.85□□□□□ -0.51
Foxa1P35582 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.85□□□□□ -0.51
Foxa1P35582 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Foxa1P35582 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Foxa1P35582 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.85□□□□□ -0.51
Foxa1P35582 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Foxa1P35582 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.85□□□□□ -0.51
Foxa1P35582 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Foxa1P35582 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxa1P35582 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.85□□□□□ -0.51
Foxa1P35582 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Foxa1P35582 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.84□□□□□ -0.51
Foxa1P35582 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Foxa1P35582 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxa1P35582 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxa1P35582 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms