Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.83□□□□□ -0.52
Nedd8P29595 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.83□□□□□ -0.52
Nedd8P29595 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Nedd8P29595 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nedd8P29595 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Nedd8P29595 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nedd8P29595 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nedd8P29595 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.82□□□□□ -0.52
Nedd8P29595 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.82□□□□□ -0.52
Nedd8P29595 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.82□□□□□ -0.52
Nedd8P29595 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.82□□□□□ -0.52
Nedd8P29595 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.82□□□□□ -0.52
Nedd8P29595 Gm24420-201ENSMUST00000176676 59 ntBASIC11.82□□□□□ -0.52
Nedd8P29595 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.82□□□□□ -0.52
Nedd8P29595 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.82□□□□□ -0.52
Nedd8P29595 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.82□□□□□ -0.52
Nedd8P29595 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.82□□□□□ -0.52
Nedd8P29595 Dupd1-202ENSMUST00000224735 548 ntBASIC11.82□□□□□ -0.52
Nedd8P29595 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.82□□□□□ -0.52
Nedd8P29595 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nedd8P29595 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
Nedd8P29595 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nedd8P29595 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nedd8P29595 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nedd8P29595 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nedd8P29595 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.81□□□□□ -0.52
Nedd8P29595 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.81□□□□□ -0.52
Nedd8P29595 Gm15460-201ENSMUST00000118147 391 ntBASIC11.81□□□□□ -0.52
Nedd8P29595 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Gm18057-201ENSMUST00000208220 503 ntBASIC11.81□□□□□ -0.52
Nedd8P29595 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.81□□□□□ -0.52
Nedd8P29595 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Nedd8P29595 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.81□□□□□ -0.52
Nedd8P29595 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.81□□□□□ -0.52
Nedd8P29595 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nedd8P29595 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms