Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp3P28862 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Mmp3P28862 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.7□□□□□ -0.22
Mmp3P28862 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Gm14109-201ENSMUST00000118814 309 ntBASIC13.7□□□□□ -0.22
Mmp3P28862 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.7□□□□□ -0.22
Mmp3P28862 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Gm16570-201ENSMUST00000161951 436 ntBASIC13.7□□□□□ -0.22
Mmp3P28862 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Gm27023-201ENSMUST00000182372 285 ntBASIC13.7□□□□□ -0.22
Mmp3P28862 Gm3096-201ENSMUST00000185770 364 ntBASIC13.7□□□□□ -0.22
Mmp3P28862 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.7□□□□□ -0.22
Mmp3P28862 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Mmp3P28862 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp3P28862 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp3P28862 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.69□□□□□ -0.22
Mmp3P28862 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.69□□□□□ -0.22
Mmp3P28862 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Mmp3P28862 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Gm45186-201ENSMUST00000206874 478 ntBASIC13.69□□□□□ -0.22
Mmp3P28862 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Mmp3P28862 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Mmp3P28862 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp3P28862 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mmp3P28862 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
Mmp3P28862 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Mmp3P28862 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Mmp3P28862 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Mmp3P28862 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Gm14999-201ENSMUST00000121039 624 ntBASIC13.68□□□□□ -0.22
Mmp3P28862 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.68□□□□□ -0.22
Mmp3P28862 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.68□□□□□ -0.22
Mmp3P28862 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.68□□□□□ -0.22
Mmp3P28862 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms