Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm28911-201ENSMUST00000188837 117 ntBASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm8515-201ENSMUST00000194852 576 ntBASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf1aP25118 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Gm11978-201ENSMUST00000122315 466 ntBASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf1aP25118 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Gm2495-201ENSMUST00000191160 466 ntBASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms