Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Tpm3P21107 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tpm3P21107 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Gm12585-201ENSMUST00000117307 290 ntBASIC14.35□□□□□ -0.11
Tpm3P21107 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Gm8000-201ENSMUST00000188378 592 ntBASIC14.35□□□□□ -0.11
Tpm3P21107 Gm43474-201ENSMUST00000196415 774 ntBASIC14.35□□□□□ -0.11
Tpm3P21107 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.35□□□□□ -0.11
Tpm3P21107 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Tpm3P21107 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tpm3P21107 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tpm3P21107 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tpm3P21107 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Tpm3P21107 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.35□□□□□ -0.11
Tpm3P21107 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.35□□□□□ -0.11
Tpm3P21107 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm3P21107 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.34□□□□□ -0.11
Tpm3P21107 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.34□□□□□ -0.11
Tpm3P21107 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tpm3P21107 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.34□□□□□ -0.11
Tpm3P21107 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.34□□□□□ -0.11
Tpm3P21107 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.34□□□□□ -0.11
Tpm3P21107 Gm44335-201ENSMUST00000196879 141 ntBASIC14.34□□□□□ -0.11
Tpm3P21107 Gm44297-201ENSMUST00000198304 141 ntBASIC14.34□□□□□ -0.11
Tpm3P21107 Gm44346-201ENSMUST00000198851 141 ntBASIC14.34□□□□□ -0.11
Tpm3P21107 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.34□□□□□ -0.11
Tpm3P21107 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Tpm3P21107 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.34□□□□□ -0.11
Tpm3P21107 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm3P21107 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Tpm3P21107 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tpm3P21107 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tpm3P21107 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tpm3P21107 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.33□□□□□ -0.12
Tpm3P21107 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tpm3P21107 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.33□□□□□ -0.12
Tpm3P21107 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Gm27741-201ENSMUST00000185060 237 ntBASIC14.33□□□□□ -0.12
Tpm3P21107 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.33□□□□□ -0.12
Tpm3P21107 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tpm3P21107 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.33□□□□□ -0.12
Tpm3P21107 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms