Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm13123-201ENSMUST00000122173 492 ntBASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Mir7221-201ENSMUST00000184009 72 ntBASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm10146-201ENSMUST00000072739 309 ntBASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp6P0C0A3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.98□□□□□ -0.17
Chmp6P0C0A3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm43818-201ENSMUST00000200605 466 ntBASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm18062-201ENSMUST00000208020 547 ntBASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm18055-201ENSMUST00000208254 547 ntBASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp6P0C0A3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp6P0C0A3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms