Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm23699-201ENSMUST00000158835 135 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm5616-201ENSMUST00000165252 384 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm8741-201ENSMUST00000174736 384 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm29615-201ENSMUST00000185371 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm28224-201ENSMUST00000186078 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm29001-201ENSMUST00000186177 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm28292-201ENSMUST00000186593 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm28101-201ENSMUST00000187608 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm29076-201ENSMUST00000187689 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm28302-201ENSMUST00000187931 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm28646-201ENSMUST00000188220 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm9230-201ENSMUST00000188228 532 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm28205-201ENSMUST00000189177 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm29032-201ENSMUST00000189797 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm28695-201ENSMUST00000190300 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm37448-201ENSMUST00000192795 697 ntBASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.51■□□□□ 0.23
Hoxc9P09633 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.51■□□□□ 0.23
Hoxc9P09633 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hoxc9P09633 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Hoxc9P09633 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hoxc9P09633 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hoxc9P09633 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 AY036118-201ENSMUST00000200021 923 ntBASIC16.5■□□□□ 0.23
Hoxc9P09633 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Gm29787-201ENSMUST00000222129 849 ntBASIC16.5■□□□□ 0.23
Hoxc9P09633 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.5■□□□□ 0.23
Hoxc9P09633 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hoxc9P09633 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxc9P09633 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Gm23949-201ENSMUST00000104027 127 ntBASIC16.49■□□□□ 0.23
Hoxc9P09633 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Gm9555-201ENSMUST00000200908 583 ntBASIC16.49■□□□□ 0.23
Hoxc9P09633 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Hoxc9P09633 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxc9P09633 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.49■□□□□ 0.23
Hoxc9P09633 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Hoxc9P09633 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxc9P09633 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hoxc9P09633 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxc9P09633 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxc9P09633 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms