Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.56□□□□□ -0.24
Hoxc8P09025 Gm15711-201ENSMUST00000118889 535 ntBASIC13.56□□□□□ -0.24
Hoxc8P09025 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.56□□□□□ -0.24
Hoxc8P09025 Gm27627-201ENSMUST00000183644 150 ntBASIC13.56□□□□□ -0.24
Hoxc8P09025 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.56□□□□□ -0.24
Hoxc8P09025 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.56□□□□□ -0.24
Hoxc8P09025 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.56□□□□□ -0.24
Hoxc8P09025 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.56□□□□□ -0.24
Hoxc8P09025 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxc8P09025 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Gm24934-201ENSMUST00000103764 111 ntBASIC13.55□□□□□ -0.24
Hoxc8P09025 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.55□□□□□ -0.24
Hoxc8P09025 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Gm14760-201ENSMUST00000121831 999 ntBASIC13.55□□□□□ -0.24
Hoxc8P09025 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.55□□□□□ -0.24
Hoxc8P09025 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.55□□□□□ -0.24
Hoxc8P09025 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.55□□□□□ -0.24
Hoxc8P09025 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxc8P09025 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hoxc8P09025 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Hoxc8P09025 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm15515-201ENSMUST00000117827 822 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm11450-201ENSMUST00000121144 333 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm23699-201ENSMUST00000158835 135 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm44958-201ENSMUST00000203734 736 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm5369-201ENSMUST00000217499 588 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm29787-201ENSMUST00000222129 849 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms