Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm8018-201ENSMUST00000173536 789 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm5904-201ENSMUST00000210286 865 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm7046-201ENSMUST00000221351 977 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm7399-201ENSMUST00000032395 858 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxa4P06798 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.63□□□□□ -0.39
Hoxa4P06798 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa4P06798 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxa4P06798 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.62□□□□□ -0.39
Hoxa4P06798 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.62□□□□□ -0.39
Hoxa4P06798 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm13316-201ENSMUST00000140537 691 ntBASIC12.62□□□□□ -0.39
Hoxa4P06798 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Mir1938-201ENSMUST00000158746 100 ntBASIC12.62□□□□□ -0.39
Hoxa4P06798 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.62□□□□□ -0.39
Hoxa4P06798 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.62□□□□□ -0.39
Hoxa4P06798 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa4P06798 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.62□□□□□ -0.39
Hoxa4P06798 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxa4P06798 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxa4P06798 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxa4P06798 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxa4P06798 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Hoxa4P06798 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.61□□□□□ -0.39
Hoxa4P06798 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxa4P06798 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Hoxa4P06798 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa4P06798 Gm45925-201ENSMUST00000218882 744 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms