Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P04940 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.39□□□□□ -0.75
P04940 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
P04940 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.39□□□□□ -0.75
P04940 Gm11424-201ENSMUST00000121929 829 ntBASIC10.39□□□□□ -0.75
P04940 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.39□□□□□ -0.75
P04940 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.39□□□□□ -0.75
P04940 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.39□□□□□ -0.75
P04940 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.39□□□□□ -0.75
P04940 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.39□□□□□ -0.75
P04940 Gm17150-201ENSMUST00000165577 381 ntBASIC10.39□□□□□ -0.75
P04940 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.39□□□□□ -0.75
P04940 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.39□□□□□ -0.75
P04940 Gm38092-201ENSMUST00000195600 653 ntBASIC10.39□□□□□ -0.75
P04940 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.39□□□□□ -0.75
P04940 Gm43818-201ENSMUST00000200605 466 ntBASIC10.39□□□□□ -0.75
P04940 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Gm24526-201ENSMUST00000082921 158 ntBASIC10.39□□□□□ -0.75
P04940 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P04940 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
P04940 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
P04940 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P04940 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04940 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Rubie-203ENSMUST00000227803 2430 ntBASIC10.38□□□□□ -0.75
P04940 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.38□□□□□ -0.75
P04940 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.38□□□□□ -0.75
P04940 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
P04940 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.38□□□□□ -0.75
P04940 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
P04940 Gm1335-201ENSMUST00000121653 386 ntBASIC10.38□□□□□ -0.75
P04940 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
P04940 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.38□□□□□ -0.75
P04940 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.38□□□□□ -0.75
P04940 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
P04940 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.38□□□□□ -0.75
P04940 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.38□□□□□ -0.75
P04940 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.38□□□□□ -0.75
P04940 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.38□□□□□ -0.75
P04940 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.38□□□□□ -0.75
P04940 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.38□□□□□ -0.75
P04940 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04940 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.38□□□□□ -0.75
P04940 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.38□□□□□ -0.75
P04940 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04940 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
P04940 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04940 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms