Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Col4a1P02463 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Col4a1P02463 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col4a1P02463 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Col4a1P02463 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm15595-201ENSMUST00000120840 961 ntBASIC15.44■□□□□ 0.06
Col4a1P02463 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Col4a1P02463 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
Col4a1P02463 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.44■□□□□ 0.06
Col4a1P02463 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.44■□□□□ 0.06
Col4a1P02463 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.44■□□□□ 0.06
Col4a1P02463 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.44■□□□□ 0.06
Col4a1P02463 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col4a1P02463 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.44■□□□□ 0.06
Col4a1P02463 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.44■□□□□ 0.06
Col4a1P02463 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.44■□□□□ 0.06
Col4a1P02463 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.44■□□□□ 0.06
Col4a1P02463 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.44■□□□□ 0.06
Col4a1P02463 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.44■□□□□ 0.06
Col4a1P02463 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.44■□□□□ 0.06
Col4a1P02463 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col4a1P02463 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.44■□□□□ 0.06
Col4a1P02463 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col4a1P02463 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col4a1P02463 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Gm23596-201ENSMUST00000104304 132 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Gm9062-201ENSMUST00000117712 727 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Gm16166-201ENSMUST00000118291 787 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Gm25881-201ENSMUST00000157783 103 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Gm28071-201ENSMUST00000190355 478 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Col4a1P02463 Gm21811-201ENSMUST00000096485 930 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.43■□□□□ 0.06
Col4a1P02463 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.43■□□□□ 0.06
Col4a1P02463 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col4a1P02463 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col4a1P02463 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.42■□□□□ 0.06
Col4a1P02463 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Gm22133-201ENSMUST00000102082 109 ntBASIC15.42■□□□□ 0.06
Col4a1P02463 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.42■□□□□ 0.06
Col4a1P02463 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.42■□□□□ 0.06
Col4a1P02463 Gm4607-201ENSMUST00000206649 577 ntBASIC15.42■□□□□ 0.06
Col4a1P02463 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.42■□□□□ 0.06
Col4a1P02463 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.42■□□□□ 0.06
Col4a1P02463 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col4a1P02463 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col4a1P02463 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms