Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
H3f3cP02301 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.04□□□□□ -0.64
H3f3cP02301 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
H3f3cP02301 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3cP02301 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.04□□□□□ -0.64
H3f3cP02301 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H3f3cP02301 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
H3f3cP02301 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3cP02301 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3cP02301 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3cP02301 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Gm4984-201ENSMUST00000115987 360 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.03□□□□□ -0.64
H3f3cP02301 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3cP02301 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3cP02301 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3cP02301 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.03□□□□□ -0.64
H3f3cP02301 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.03□□□□□ -0.64
H3f3cP02301 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3cP02301 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3cP02301 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3cP02301 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3cP02301 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3cP02301 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3cP02301 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3cP02301 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
H3f3cP02301 Gm13829-201ENSMUST00000119600 138 ntBASIC11.02□□□□□ -0.65
H3f3cP02301 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.02□□□□□ -0.65
H3f3cP02301 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.02□□□□□ -0.65
H3f3cP02301 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.02□□□□□ -0.65
H3f3cP02301 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Gm43433-201ENSMUST00000196573 481 ntBASIC11.02□□□□□ -0.65
H3f3cP02301 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
H3f3cP02301 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3cP02301 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms