Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Setdb1O88974 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Setdb1O88974 Gm6407-201ENSMUST00000176468 549 ntBASIC15.66■□□□□ 0.1
Setdb1O88974 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.66■□□□□ 0.1
Setdb1O88974 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Setdb1O88974 Matn2-206ENSMUST00000228570 2798 ntBASIC15.66■□□□□ 0.1
Setdb1O88974 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Setdb1O88974 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Setdb1O88974 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Setdb1O88974 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.65■□□□□ 0.1
Setdb1O88974 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.65■□□□□ 0.1
Setdb1O88974 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Setdb1O88974 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.65■□□□□ 0.1
Setdb1O88974 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Setdb1O88974 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Setdb1O88974 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Setdb1O88974 Gm15547-201ENSMUST00000122152 333 ntBASIC15.65■□□□□ 0.1
Setdb1O88974 Gm14665-201ENSMUST00000122294 557 ntBASIC15.65■□□□□ 0.1
Setdb1O88974 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Setdb1O88974 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.65■□□□□ 0.1
Setdb1O88974 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.65■□□□□ 0.1
Setdb1O88974 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.65■□□□□ 0.1
Setdb1O88974 Gm7003-201ENSMUST00000195089 312 ntBASIC15.65■□□□□ 0.1
Setdb1O88974 Gm9555-201ENSMUST00000200908 583 ntBASIC15.65■□□□□ 0.1
Setdb1O88974 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.65■□□□□ 0.1
Setdb1O88974 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Setdb1O88974 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Setdb1O88974 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Setdb1O88974 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.64■□□□□ 0.09
Setdb1O88974 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.64■□□□□ 0.09
Setdb1O88974 Gm13611-201ENSMUST00000118269 318 ntBASIC15.64■□□□□ 0.09
Setdb1O88974 Gm13875-201ENSMUST00000120162 282 ntBASIC15.64■□□□□ 0.09
Setdb1O88974 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.64■□□□□ 0.09
Setdb1O88974 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.64■□□□□ 0.09
Setdb1O88974 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Setdb1O88974 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Setdb1O88974 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.64■□□□□ 0.09
Setdb1O88974 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.64■□□□□ 0.09
Setdb1O88974 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.64■□□□□ 0.09
Setdb1O88974 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Setdb1O88974 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Setdb1O88974 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Setdb1O88974 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Setdb1O88974 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Setdb1O88974 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.63■□□□□ 0.09
Setdb1O88974 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Setdb1O88974 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms