Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm29001-201ENSMUST00000186177 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Syn1O88935 Gm28292-201ENSMUST00000186593 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm28101-201ENSMUST00000187608 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm29076-201ENSMUST00000187689 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm28302-201ENSMUST00000187931 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm28646-201ENSMUST00000188220 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm28205-201ENSMUST00000189177 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm29032-201ENSMUST00000189797 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm28695-201ENSMUST00000190300 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm37448-201ENSMUST00000192795 697 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Gm37666-201ENSMUST00000194110 866 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Gm43916-201ENSMUST00000205062 967 ntBASIC13.2□□□□□ -0.3
Syn1O88935 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Gm25517-201ENSMUST00000083865 134 ntBASIC13.2□□□□□ -0.3
Syn1O88935 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.2□□□□□ -0.3
Syn1O88935 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Syn1O88935 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Syn1O88935 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Syn1O88935 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Gm25880-201ENSMUST00000104331 132 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 Gm13492-201ENSMUST00000119772 665 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.19□□□□□ -0.3
Syn1O88935 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Gm32999-201ENSMUST00000192693 562 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Syn1O88935 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Syn1O88935 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syn1O88935 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.19□□□□□ -0.3
Syn1O88935 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Syn1O88935 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Syn1O88935 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Syn1O88935 Gm11978-201ENSMUST00000122315 466 ntBASIC13.18□□□□□ -0.3
Syn1O88935 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.18□□□□□ -0.3
Syn1O88935 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Syn1O88935 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.18□□□□□ -0.3
Syn1O88935 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Syn1O88935 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.18□□□□□ -0.3
Syn1O88935 Gm17889-201ENSMUST00000198410 598 ntBASIC13.18□□□□□ -0.3
Syn1O88935 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.18□□□□□ -0.3
Syn1O88935 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.18□□□□□ -0.3
Syn1O88935 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Syn1O88935 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.18□□□□□ -0.3
Syn1O88935 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Syn1O88935 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syn1O88935 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Syn1O88935 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms