Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.85□□□□□ -0.51
Cops4O88544 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gm44124-201ENSMUST00000204159 472 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cops4O88544 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.85□□□□□ -0.51
Cops4O88544 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.85□□□□□ -0.51
Cops4O88544 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.85□□□□□ -0.51
Cops4O88544 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cops4O88544 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Cops4O88544 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cops4O88544 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Cops4O88544 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.84□□□□□ -0.51
Cops4O88544 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.84□□□□□ -0.51
Cops4O88544 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.84□□□□□ -0.51
Cops4O88544 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.84□□□□□ -0.51
Cops4O88544 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cops4O88544 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cops4O88544 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.83□□□□□ -0.51
Cops4O88544 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.83□□□□□ -0.52
Cops4O88544 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.83□□□□□ -0.52
Cops4O88544 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.83□□□□□ -0.52
Cops4O88544 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Cops4O88544 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cops4O88544 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.83□□□□□ -0.52
Cops4O88544 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.83□□□□□ -0.52
Cops4O88544 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms