Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim1O70400 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Pdlim1O70400 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.71□□□□□ -0.38
Pdlim1O70400 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.7□□□□□ -0.38
Pdlim1O70400 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.7□□□□□ -0.38
Pdlim1O70400 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Gm11591-201ENSMUST00000120063 702 ntBASIC12.7□□□□□ -0.38
Pdlim1O70400 Gm25261-201ENSMUST00000157416 134 ntBASIC12.7□□□□□ -0.38
Pdlim1O70400 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pdlim1O70400 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdlim1O70400 Gm37424-201ENSMUST00000191727 561 ntBASIC12.7□□□□□ -0.38
Pdlim1O70400 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.7□□□□□ -0.38
Pdlim1O70400 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdlim1O70400 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Gm24526-201ENSMUST00000082921 158 ntBASIC12.7□□□□□ -0.38
Pdlim1O70400 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdlim1O70400 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pdlim1O70400 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim1O70400 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim1O70400 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim1O70400 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms