Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.84□□□□□ -0.67
Cxcl13O55038 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cxcl13O55038 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.83□□□□□ -0.68
Cxcl13O55038 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm15236-201ENSMUST00000117309 379 ntBASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.83□□□□□ -0.68
Cxcl13O55038 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm16296-201ENSMUST00000159905 325 ntBASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.83□□□□□ -0.68
Cxcl13O55038 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.83□□□□□ -0.68
Cxcl13O55038 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cxcl13O55038 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cxcl13O55038 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm23270-201ENSMUST00000104055 131 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm13736-201ENSMUST00000119272 253 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm8018-201ENSMUST00000173536 789 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm37201-201ENSMUST00000191845 523 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.82□□□□□ -0.68
Cxcl13O55038 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cxcl13O55038 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cxcl13O55038 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms