Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sptlc1O35704 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sptlc1O35704 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sptlc1O35704 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sptlc1O35704 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sptlc1O35704 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sptlc1O35704 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Sptlc1O35704 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sptlc1O35704 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Gm37234-201ENSMUST00000193259 1441 ntBASIC14.27□□□□□ -0.12
Sptlc1O35704 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.27□□□□□ -0.12
Sptlc1O35704 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sptlc1O35704 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gm11222-201ENSMUST00000119005 738 ntBASIC14.27□□□□□ -0.13
Sptlc1O35704 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gm37517-201ENSMUST00000194004 1289 ntBASIC14.27□□□□□ -0.13
Sptlc1O35704 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.27□□□□□ -0.13
Sptlc1O35704 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.27□□□□□ -0.13
Sptlc1O35704 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.27□□□□□ -0.13
Sptlc1O35704 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.27□□□□□ -0.13
Sptlc1O35704 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.27□□□□□ -0.13
Sptlc1O35704 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sptlc1O35704 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.26□□□□□ -0.13
Sptlc1O35704 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Gm13740-201ENSMUST00000120590 310 ntBASIC14.26□□□□□ -0.13
Sptlc1O35704 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.26□□□□□ -0.13
Sptlc1O35704 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC14.26□□□□□ -0.13
Sptlc1O35704 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.26□□□□□ -0.13
Sptlc1O35704 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.26□□□□□ -0.13
Sptlc1O35704 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.26□□□□□ -0.13
Sptlc1O35704 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.26□□□□□ -0.13
Sptlc1O35704 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sptlc1O35704 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms