Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.54□□□□□ -0.4
Npc1O35604 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Npc1O35604 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Npc1O35604 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npc1O35604 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npc1O35604 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npc1O35604 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npc1O35604 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Npc1O35604 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Npc1O35604 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.53□□□□□ -0.4
Npc1O35604 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.53□□□□□ -0.4
Npc1O35604 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Mir686-201ENSMUST00000102174 109 ntBASIC12.53□□□□□ -0.4
Npc1O35604 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.53□□□□□ -0.4
Npc1O35604 Gm42627-201ENSMUST00000197347 224 ntBASIC12.53□□□□□ -0.4
Npc1O35604 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.53□□□□□ -0.4
Npc1O35604 Gm6013-201ENSMUST00000212264 699 ntBASIC12.53□□□□□ -0.4
Npc1O35604 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.53□□□□□ -0.4
Npc1O35604 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Npc1O35604 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Npc1O35604 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Npc1O35604 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Npc1O35604 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.53□□□□□ -0.4
Npc1O35604 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Npc1O35604 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.53□□□□□ -0.4
Npc1O35604 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Npc1O35604 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npc1O35604 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npc1O35604 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npc1O35604 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Npc1O35604 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Npc1O35604 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Npc1O35604 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npc1O35604 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npc1O35604 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Gm23931-201ENSMUST00000103842 109 ntBASIC12.52□□□□□ -0.41
Npc1O35604 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Npc1O35604 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.52□□□□□ -0.41
Npc1O35604 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.52□□□□□ -0.41
Npc1O35604 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Gm37008-201ENSMUST00000195712 319 ntBASIC12.52□□□□□ -0.41
Npc1O35604 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Gm19309-201ENSMUST00000218295 205 ntBASIC12.52□□□□□ -0.41
Npc1O35604 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.52□□□□□ -0.41
Npc1O35604 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.52□□□□□ -0.41
Npc1O35604 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.52□□□□□ -0.41
Npc1O35604 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.52□□□□□ -0.41
Npc1O35604 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.52□□□□□ -0.41
Npc1O35604 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.52□□□□□ -0.41
Npc1O35604 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npc1O35604 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Npc1O35604 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.51□□□□□ -0.41
Npc1O35604 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.51□□□□□ -0.41
Npc1O35604 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Npc1O35604 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Npc1O35604 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.51□□□□□ -0.41
Npc1O35604 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms