Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Stx1aO35526 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Stx1aO35526 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Stx1aO35526 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.4□□□□□ -0.1
Stx1aO35526 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Stx1aO35526 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Stx1aO35526 Gm26035-201ENSMUST00000083065 308 ntBASIC14.4□□□□□ -0.1
Stx1aO35526 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Stx1aO35526 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.4□□□□□ -0.1
Stx1aO35526 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stx1aO35526 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Gm14719-201ENSMUST00000121891 340 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Gm9630-201ENSMUST00000178304 885 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Mir7684-201ENSMUST00000183858 60 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Gm44069-201ENSMUST00000204898 506 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Gm7730-201ENSMUST00000212486 454 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Stx1aO35526 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Stx1aO35526 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stx1aO35526 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Stx1aO35526 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.39□□□□□ -0.11
Stx1aO35526 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Stx1aO35526 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.38□□□□□ -0.11
Stx1aO35526 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Stx1aO35526 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.38□□□□□ -0.11
Stx1aO35526 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.38□□□□□ -0.11
Stx1aO35526 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Stx1aO35526 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Gm15321-201ENSMUST00000121290 288 ntBASIC14.38□□□□□ -0.11
Stx1aO35526 Gm12291-201ENSMUST00000121627 311 ntBASIC14.38□□□□□ -0.11
Stx1aO35526 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.38□□□□□ -0.11
Stx1aO35526 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.38□□□□□ -0.11
Stx1aO35526 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Stx1aO35526 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms