Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Proscos-202ENSMUST00000178990 666 ntBASIC11.42□□□□□ -0.58
OtpO09113 Gm8515-201ENSMUST00000194852 576 ntBASIC11.42□□□□□ -0.58
OtpO09113 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.42□□□□□ -0.58
OtpO09113 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.42□□□□□ -0.58
OtpO09113 Gm18473-201ENSMUST00000220543 868 ntBASIC11.42□□□□□ -0.58
OtpO09113 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.42□□□□□ -0.58
OtpO09113 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.42□□□□□ -0.58
OtpO09113 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.42□□□□□ -0.58
OtpO09113 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
OtpO09113 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
OtpO09113 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
OtpO09113 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtpO09113 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Mir686-201ENSMUST00000102174 109 ntBASIC11.41□□□□□ -0.58
OtpO09113 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.41□□□□□ -0.58
OtpO09113 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.41□□□□□ -0.58
OtpO09113 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.41□□□□□ -0.58
OtpO09113 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
OtpO09113 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.41□□□□□ -0.58
OtpO09113 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.41□□□□□ -0.58
OtpO09113 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.41□□□□□ -0.58
OtpO09113 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtpO09113 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.4□□□□□ -0.58
OtpO09113 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.4□□□□□ -0.58
OtpO09113 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
OtpO09113 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
OtpO09113 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
OtpO09113 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
OtpO09113 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.4□□□□□ -0.58
OtpO09113 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.4□□□□□ -0.58
OtpO09113 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
OtpO09113 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
OtpO09113 Gm13369-201ENSMUST00000119442 987 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms