Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Ube3aO08759 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.88□□□□□ -0.19
Ube3aO08759 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3aO08759 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3aO08759 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3aO08759 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.88□□□□□ -0.19
Ube3aO08759 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ube3aO08759 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Ube3aO08759 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Gm15321-201ENSMUST00000121290 288 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube3aO08759 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.87□□□□□ -0.19
Ube3aO08759 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm21854-201ENSMUST00000179901 471 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Gm24694-201ENSMUST00000180054 110 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Gm27663-201ENSMUST00000184839 110 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm44855-201ENSMUST00000205725 362 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.87□□□□□ -0.19
Ube3aO08759 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Ube3aO08759 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube3aO08759 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Ube3aO08759 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.87□□□□□ -0.19
Ube3aO08759 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube3aO08759 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ube3aO08759 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.86□□□□□ -0.19
Ube3aO08759 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.86□□□□□ -0.19
Ube3aO08759 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ube3aO08759 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ube3aO08759 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ube3aO08759 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.86□□□□□ -0.19
Ube3aO08759 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube3aO08759 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube3aO08759 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3aO08759 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3aO08759 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.85□□□□□ -0.19
Ube3aO08759 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3aO08759 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3aO08759 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3aO08759 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ube3aO08759 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube3aO08759 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms