Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gm14724-201ENSMUST00000118400 537 ntBASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gm7666-201ENSMUST00000146631 819 ntBASIC12.04□□□□□ -0.48
Colca2F8VPY8 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gm807-202ENSMUST00000224929 408 ntBASIC12.04□□□□□ -0.48
Colca2F8VPY8 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.04□□□□□ -0.48
Colca2F8VPY8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Colca2F8VPY8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm11675-201ENSMUST00000121873 832 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm6407-201ENSMUST00000176468 549 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm8100-201ENSMUST00000182906 988 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm9132-201ENSMUST00000210182 832 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.03□□□□□ -0.48
Colca2F8VPY8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Colca2F8VPY8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Colca2F8VPY8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Colca2F8VPY8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Colca2F8VPY8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Colca2F8VPY8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.02□□□□□ -0.48
Colca2F8VPY8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Colca2F8VPY8 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.02□□□□□ -0.48
Colca2F8VPY8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Colca2F8VPY8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Colca2F8VPY8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Colca2F8VPY8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Colca2F8VPY8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Colca2F8VPY8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Colca2F8VPY8 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Colca2F8VPY8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.02□□□□□ -0.49
Colca2F8VPY8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms