Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Gm16166-201ENSMUST00000118291 787 ntBASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Gm45481-201ENSMUST00000209717 877 ntBASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc188F6WEU2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm11509-201ENSMUST00000117358 325 ntBASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm26368-201ENSMUST00000157826 118 ntBASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm8723-201ENSMUST00000166076 820 ntBASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm8701-201ENSMUST00000169259 874 ntBASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm2965-201ENSMUST00000198365 343 ntBASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Gm19994-201ENSMUST00000217086 586 ntBASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc188F6WEU2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.83□□□□□ -0.35
Ccdc188F6WEU2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc188F6WEU2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc188F6WEU2 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.83□□□□□ -0.35
Ccdc188F6WEU2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc188F6WEU2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Gm14724-201ENSMUST00000118400 537 ntBASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccdc188F6WEU2 Gm43184-201ENSMUST00000197247 542 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms