Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm11478-201ENSMUST00000117851 599 ntBASIC13.18□□□□□ -0.3
Atf6F6VAN0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm14704-201ENSMUST00000120300 874 ntBASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm37497-201ENSMUST00000195830 798 ntBASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.18□□□□□ -0.3
Atf6F6VAN0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm10146-201ENSMUST00000072739 309 ntBASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.18□□□□□ -0.3
Atf6F6VAN0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atf6F6VAN0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.17□□□□□ -0.3
Atf6F6VAN0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.17□□□□□ -0.3
Atf6F6VAN0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm12291-201ENSMUST00000121627 311 ntBASIC13.17□□□□□ -0.3
Atf6F6VAN0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm22331-201ENSMUST00000158066 136 ntBASIC13.17□□□□□ -0.3
Atf6F6VAN0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.17□□□□□ -0.3
Atf6F6VAN0 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.17□□□□□ -0.3
Atf6F6VAN0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atf6F6VAN0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.16□□□□□ -0.3
Atf6F6VAN0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Gm26185-201ENSMUST00000157692 266 ntBASIC13.16□□□□□ -0.3
Atf6F6VAN0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.16□□□□□ -0.3
Atf6F6VAN0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.16□□□□□ -0.3
Atf6F6VAN0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.16□□□□□ -0.3
Atf6F6VAN0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atf6F6VAN0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms