Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc149F6V035 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc149F6V035 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc149F6V035 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc149F6V035 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm11531-201ENSMUST00000117614 555 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm12058-201ENSMUST00000118614 437 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm44405-201ENSMUST00000198952 126 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm5950-201ENSMUST00000213337 772 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.02□□□□□ -0.33
Ccdc149F6V035 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc149F6V035 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Gm16570-201ENSMUST00000161951 436 ntBASIC13.01□□□□□ -0.33
Ccdc149F6V035 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.01□□□□□ -0.33
Ccdc149F6V035 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.01□□□□□ -0.33
Ccdc149F6V035 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc149F6V035 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc149F6V035 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc149F6V035 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Gm28386-201ENSMUST00000189147 1849 ntBASIC13□□□□□ -0.33
Ccdc149F6V035 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc149F6V035 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc149F6V035 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Gm24830-201ENSMUST00000102024 166 ntBASIC13□□□□□ -0.33
Ccdc149F6V035 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc149F6V035 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms