Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Snora73a-201ENSMUST00000082453 205 ntBASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cpsf4lE9Q2N0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm23931-201ENSMUST00000103842 109 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm11591-201ENSMUST00000120063 702 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm25261-201ENSMUST00000157416 134 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm18062-201ENSMUST00000208020 547 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm18055-201ENSMUST00000208254 547 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms